Changelog

Source: NEWS.md

version 1.0.0

New Features

• Multipart upload functionality. The maximum file upload size has been increased to 100 GB. File_upload automatically uses multipart upload for files with size larger than the multipart_threshold.

• To improve developer experience in shiny applications users can add verbose logs in log file by leveraging logger package. Users can create log file and set the log-level using configure_logger and add logs using log_message functions.

• EDP Health Check. Perform a quick check to test your EDP credentials, connection, user details and vaults using edp_health_check function.

• Dataset Export to parquet file format. Export the EDP Datasets into parquet file and load the data into R dataframe using Dataset_load() function. This function leverages arrow::read_parquet function.

• Refactored login flow for EDP Shiny application to support component based authorization using the quartzbio_shiny_auth function.

Improvements

• add GitHub workflows to run R CMD check. (EDPDEV-2381)

Bug Fixes

• Fixed the shiny wrapper to connect to EDP with the new connection system. Removed createEnv to use connect() in the shiny wrapper to use the new credential system. EDPDEV-2141
• Fixed Dataset_import() to limit the number of records that can be imported to 5000 at a time. EDPDEV-1862
• Fixed the error occurring when querying dataset containing list fields. Made changes to format_df_like_model to assign the object class correctly for list field values in dataset. EDPDEV-911

version 0.99

• beta version of the former solvebio R package.Refactoring ot the former solvebio R package. A migration of previous functions to the new interface has started.
• refactoring the connection functions: autoconnect(), set_connection(), connect_with_profile().
• refactoring objects interfaces: Datasets(), Files(), Vaults(), Folders().
• direct creation of Datasets from R data.frames.
• Dataset_query() has been parallelized (see fetch_next(), fetch_prev() and fetch_all() functions).
• revamp filters() interface.
• New functions
  • Dataset(), Datasets()
  • DatasetField()
  • Dataset_create()
  • Dataset_import()
  • Dataset_query()
  • File(), Files()
  • File_download(), File_get_download_url()
  • File_query(), File_read(), File_upload()
  • Folder(), Folder_create(), Folders()
  • Object(), Objects()
  • Task(), Tasks()
  • User()
  • Vault(), Vaults()
  • autoconnect()
  • connect(), connect_with_profile()
  • delete()
  • fetch_next(), fetch_prev(),fetch_all()
  • filters()
  • fetch(), fetch_vaults()